Information for 10-ACRACWACAA (Motif 12)


Reverse Opposite:

p-value:1e-8
log p-value:-2.013e+01
Information Content per bp:1.723
Number of Target Sequences with motif469.0
Percentage of Target Sequences with motif10.42%
Number of Background Sequences with motif3612.7
Percentage of Background Sequences with motif7.93%
Average Position of motif in Targets261.0 +/- 155.8bp
Average Position of motif in Background270.8 +/- 160.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---ACRACWACAA--
CAAACAACAACACCT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ACRACWACAA--
NWAACCACADNN

MA0511.1_RUNX2/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ACRACWACAA-----
CAAACCACAAACCCC

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ACRACWACAA-
-AAACCACANN

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACRACWACAA-
-AAACCACAGC

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACRACWACAA
NAAACCACAG

MA0002.2_RUNX1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACRACWACAA--
-AAACCACAGAN

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ACRACWACAA
ATGTCACAACAACAC

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACRACWACAA--
ATTTACGACAAATAGC

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACRACWACAA---
---RNAACAATGG