Information for 2-GTAGTCCC (Motif 13)


Reverse Opposite:

p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.891
Number of Target Sequences with motif696.0
Percentage of Target Sequences with motif15.46%
Number of Background Sequences with motif5683.5
Percentage of Background Sequences with motif12.48%
Average Position of motif in Targets287.5 +/- 156.9bp
Average Position of motif in Background278.1 +/- 157.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0027.1_En1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTAGTCCC-
AAGTAGTGCCC

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GTAGTCCC
GGTAAGTA-----

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTAGTCCC-
-TAATCCCN

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTAGTCCC
CNGTCCTCCC

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GTAGTCCC---
NNANTGGTGGTCTTNNN

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GTAGTCCC---
GNNAGCTAATCCCCCN

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GTAGTCCC----
NNNNGGTACCCCCCANN

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTCCC-----
NTTGTTAATCCCTCTNN

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTAGTCCC-
NYTAATCCYB

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GTAGTCCC----
GANNATTAATCCCTNNN