Information for 14-GTTATGTTAAGT (Motif 17)


Reverse Opposite:

p-value:1e-7
log p-value:-1.709e+01
Information Content per bp:1.879
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets239.8 +/- 113.0bp
Average Position of motif in Background210.7 +/- 150.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0025.1_NFIL3/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTTATGTTAAGT
-TTATGTAACAT

MA0033.1_FOXL1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTTATGTTAAGT
--TATGTNTA--

PH0115.1_Nkx2-6/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTTATGTTAAGT------
--AATNTTAAGTGGNTNN

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTTATGTTAAGT------
--AATTTCAAGTGGCTTN

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTTATGTTAAGT
KCTATTTTTRGH

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTTATGTTAAGT
YSTTATCT-----

MA0122.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GTTATGTTAAGT---
------TTAAGTGGA

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTTATGTTAAGT-------
--NTNNTTAAGTGGNTNAN

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTTATGTTAAGT------
--AANTTCAAGTGGCTTN

MA0029.1_Mecom/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTTATGTTAAGT-
TNTTATCTTATCTT