Information for 15-ACACACACGCGC (Motif 19)


Reverse Opposite:

p-value:1e-7
log p-value:-1.625e+01
Information Content per bp:1.745
Number of Target Sequences with motif217.0
Percentage of Target Sequences with motif4.82%
Number of Background Sequences with motif1515.8
Percentage of Background Sequences with motif3.33%
Average Position of motif in Targets267.3 +/- 137.8bp
Average Position of motif in Background291.1 +/- 166.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.83
Offset:-4
Orientation:forward strand
Alignment:----ACACACACGCGC
AGCGGCACACACGCAA

MA0472.1_EGR2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ACACACACGCGC
CCCCCGCCCACGCAC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACACACACGCGC
-CRCCCACGCA-

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACACACACGCGC
CGAAGCACACAAAATA

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACACACACGCGC
YCCGCCCACGCN-

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACACACACGCGC
-CACGCA-----

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACACACACGCGC
GGCCACACCCAN--

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACACACACGCGC
GGCCACACCCA---

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACACACACGCGC
TBGCACGCAA----

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACACACACGCGC
GCCACACCCA-----