Information for 9-TATCGCTC (Motif 20)


Reverse Opposite:

p-value:1e-6
log p-value:-1.528e+01
Information Content per bp:1.841
Number of Target Sequences with motif172.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif1159.7
Percentage of Background Sequences with motif2.55%
Average Position of motif in Targets288.8 +/- 159.3bp
Average Position of motif in Background281.6 +/- 161.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TATCGCTC-
NTATYGATCH

PB0127.1_Gata6_2/Jaspar

Match Rank:2
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------TATCGCTC--
GCGGCGATATCGCAGCG

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TATCGCTC
YCTTATCWVN-

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TATCGCTC
YSTTATCT---

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TATCGCTC---
TTTTCGCGCGAA

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TATCGCTC
---NGCTN

PB0023.1_Gata6_1/Jaspar

Match Rank:7
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TATCGCTC--
NNANTCTTATCTNNNNN

MA0482.1_Gata4/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TATCGCTC
TCTTATCTCCC

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TATCGCTC--
NNNTTGGTTTCGNTNNN

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TATCGCTC--
VDTTTCCCGCCA