Information for 10-YTCTTTTC (Motif 21)


Reverse Opposite:

p-value:1e-6
log p-value:-1.511e+01
Information Content per bp:1.688
Number of Target Sequences with motif1873.0
Percentage of Target Sequences with motif41.60%
Number of Background Sequences with motif17288.7
Percentage of Background Sequences with motif37.95%
Average Position of motif in Targets271.5 +/- 158.6bp
Average Position of motif in Background274.4 +/- 160.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0035.3_Gata1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:YTCTTTTC---
TTCTTATCTGT

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:YTCTTTTC--
NNCTTATCTN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:YTCTTTTC--
NCCTTATCTG

PB0023.1_Gata6_1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---YTCTTTTC------
NNANTCTTATCTNNNNN

PB0022.1_Gata5_1/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---YTCTTTTC------
NTNTTCTTATCAGTNTN

PB0021.1_Gata3_1/Jaspar

Match Rank:6
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------YTCTTTTC--------
NNTNANTTCTTATCTCTANANN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:YTCTTTTC---
-YCTTATCWVN

MA0482.1_Gata4/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:YTCTTTTC----
-TCTTATCTCCC

MA0036.2_GATA2/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---YTCTTTTC---
AGATTCTTATCTGT

MA0037.2_GATA3/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:YTCTTTTC-
-TCTTATCT