Information for 13-TGGCGGGCGG (Motif 22)


Reverse Opposite:

p-value:1e-6
log p-value:-1.505e+01
Information Content per bp:1.533
Number of Target Sequences with motif126.0
Percentage of Target Sequences with motif2.80%
Number of Background Sequences with motif790.5
Percentage of Background Sequences with motif1.74%
Average Position of motif in Targets272.1 +/- 157.0bp
Average Position of motif in Background287.0 +/- 154.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCGGGCGG--
NAGANTGGCGGGGNGNA

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGGCGGGCGG----
NNNAAGGGGGCGGGNNN

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGGCGGGCGG
-GGCGCGCT-

MA0079.3_SP1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGGCGGGCGG---
--GGGGGCGGGGC

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGGCGGGCGG---
GGGNGGGGGCGGGGC

MA0470.1_E2F4/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGCGGGCGG-
GGGCGGGAAGG

MA0471.1_E2F6/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGCGGGCGG-
GGGCGGGAAGG

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGCGGGCGG-----
NNTNNGGGGCGGNGNGN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGCGGGCGG----
NNTNAGGGGCGGNNNN

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGCGGGCGG---
GGGGGGGGGGGGGGA