Information for 15-GAGCATCCGA (Motif 25)


Reverse Opposite:

p-value:1e-5
log p-value:-1.312e+01
Information Content per bp:1.798
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif29.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets299.4 +/- 114.4bp
Average Position of motif in Background273.3 +/- 164.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGCATCCGA
CAGCC-----

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGCATCCGA
CGGAGC------

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGCATCCGA
GGGAGGACNG--

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GAGCATCCGA
CCGCATAGCAACGGA

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCATCCGA--
NNNNTGAGCACTGTNNG

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGCATCCGA
-ANCAGCTG-

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGCATCCGA-
CGACCATCTGTT

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GAGCATCCGA
TACCATAGCAACGGT

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAGCATCCGA----
CCNNACCATCTGGCCTN

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GAGCATCCGA--
CATAAGACCACCATTAC