Information for 16-GAGRCGCTCCTC (Motif 26)


Reverse Opposite:

p-value:1e-5
log p-value:-1.196e+01
Information Content per bp:1.639
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif16.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets280.0 +/- 142.9bp
Average Position of motif in Background289.7 +/- 167.3bp
Strand Bias (log2 ratio + to - strand density)3.4
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GAGRCGCTCCTC
-----GCTCCG-

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAGRCGCTCCTC
-CNGTCCTCCC-

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GAGRCGCTCCTC-
TTGGGGGCGCCCCTAG

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGRCGCTCCTC----
TACGAGACTCCTCTAAC

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GAGRCGCTCCTC-
-------TCCCCA

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GAGRCGCTCCTC
----NGCTN---

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GAGRCGCTCCTC-
--GCCCCGCCCCC

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GAGRCGCTCCTC-----
--GCCCCGCCCCCTCCC

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:GAGRCGCTCCTC
-----GCTTCC-

MA0130.1_ZNF354C/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:GAGRCGCTCCTC
------ATCCAC