Information for 15-AAGAAGTA (Motif 28)


Reverse Opposite:

p-value:1e-5
log p-value:-1.156e+01
Information Content per bp:1.787
Number of Target Sequences with motif1758.0
Percentage of Target Sequences with motif39.05%
Number of Background Sequences with motif16383.1
Percentage of Background Sequences with motif35.96%
Average Position of motif in Targets276.9 +/- 158.3bp
Average Position of motif in Background276.7 +/- 160.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0598.1_EHF/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAGAAGTA
CAGGAAGG-

MA0474.1_Erg/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAGAAGTA-
ACAGGAAGTGG

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AAGAAGTA---
NNNTAACAATTATAN

MA0124.1_NKX3-1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAGAAGTA-
--TAAGTAT

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAGAAGTA
ACVAGGAAGT-

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGAAGTA
-NGAAGC-

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGAAGTA
AGAGGAAGTG

MA0136.1_ELF5/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGAAGTA
AAGGAAGTA

MA0156.1_FEV/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGAAGTA
CAGGAAAT-

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGAAGTA
ACAGGAAGTG