Information for 19-GTGTAGACACTC (Motif 32)


Reverse Opposite:

p-value:1e-4
log p-value:-9.382e+00
Information Content per bp:1.953
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets154.1 +/- 98.5bp
Average Position of motif in Background287.6 +/- 126.7bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0157.1_FOXO3/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTGTAGACACTC
-TGTAAACA---

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GTGTAGACACTC
NNNVCTGWGYAAACASN-

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTGTAGACACTC---
----AGCCACTCAAG

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTGTAGACACTC
NDGTAAACARRN

MA0593.1_FOXP2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGTAGACACTC
AAGTAAACAAA-

MA0031.1_FOXD1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTGTAGACACTC
--GTAAACAT--

MA0047.2_Foxa2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTGTAGACACTC
NCTAAGTAAACA---

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTGTAGACACTC--
----AASCACTCAA

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTGTAGACACTC
TATGTAAACANG-

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTGTAGACACTC
--GTAAACAG--