Information for 20-GGCCGAGCGCGG (Motif 33)


Reverse Opposite:

p-value:1e-3
log p-value:-9.016e+00
Information Content per bp:1.834
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif347.0
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets275.6 +/- 146.0bp
Average Position of motif in Background292.5 +/- 153.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCCGAGCGCGG
GGGCGGGACC--

MA0162.2_EGR1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCCGAGCGCGG---
-GGCGGGGGCGGGGG

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGAGCGCGG-
NNNACCGAGAGTNNN

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGAGCGCGG-
NNGCNCTGCGCGGC

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGAGCGCGG-
ANTGCGGGGGCGGN

MA0469.1_E2F3/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GGCCGAGCGCGG
NNGTGNGGGCGGGAG---

MA0516.1_SP2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCCGAGCGCGG---
GGGNGGGGGCGGGGC

MA0024.2_E2F1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAGCGCGG
CGGGCGGGAGG--

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAGCGCGG
AGGCCTAG-----

MA0471.1_E2F6/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCCGAGCGCGG
GGGCGGGAAGG-