Information for 22-TAGTGTGAGTCT (Motif 35)


Reverse Opposite:

p-value:1e-3
log p-value:-8.278e+00
Information Content per bp:1.968
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets341.1 +/- 123.1bp
Average Position of motif in Background232.5 +/- 181.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGTGTGAGTCT----
NTNNNAGGAGTCTCNTN

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAGTGTGAGTCT
AGGTGHCAGACA

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAGTGTGAGTCT
ATGGGGTGAT---

MA0099.2_JUN::FOS/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TAGTGTGAGTCT
-----TGAGTCA

MA0477.1_FOSL1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TAGTGTGAGTCT--
---GGTGACTCATG

MA0476.1_FOS/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TAGTGTGAGTCT--
---TGTGACTCATT

MA0478.1_FOSL2/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TAGTGTGAGTCT---
----NTGAGTCATCN

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TAGTGTGAGTCT--
--NNATGAGTCATN

MA0490.1_JUNB/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TAGTGTGAGTCT-
--GGATGACTCAT

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TAGTGTGAGTCT--
--NDATGASTCATH