Information for 7-KSTCTCTCTCTC (Motif 6)


Reverse Opposite:

p-value:1e-14
log p-value:-3.313e+01
Information Content per bp:1.702
Number of Target Sequences with motif557.0
Percentage of Target Sequences with motif12.37%
Number of Background Sequences with motif4052.8
Percentage of Background Sequences with motif8.90%
Average Position of motif in Targets278.6 +/- 145.5bp
Average Position of motif in Background278.3 +/- 164.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---KSTCTCTCTCTC
NNAATTCTCGNTNAN

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---KSTCTCTCTCTC
ACCACTCTCGGTCAC

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:KSTCTCTCTCTC
AGTTTCAGTTTC

MA0051.1_IRF2/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----KSTCTCTCTCTC-
GTTTTGCTTTCACTTTCC

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:KSTCTCTCTCTC
ACTTTCACTTTC

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:KSTCTCTCTCTC
ACTTTCACTTTC

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-KSTCTCTCTCTC
AGGTCTCTAACC-

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---KSTCTCTCTCTC
AGTATTCTCGGTTGC

MA0508.1_PRDM1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--KSTCTCTCTCTC-
TCACTTTCACTTTCN

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-KSTCTCTCTCTC-----
NAGTTTCABTHTGACTNW