Information for 8-TAGCATTAGG (Motif 9)


Reverse Opposite:

p-value:1e-10
log p-value:-2.513e+01
Information Content per bp:1.923
Number of Target Sequences with motif101.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif485.5
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets291.2 +/- 148.2bp
Average Position of motif in Background290.2 +/- 157.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0132.1_Pdx1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TAGCATTAGG
---AATTAG-

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TAGCATTAGG
--GGATTAGC

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAGCATTAGG
-RGGATTAR-

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAGCATTAGG----
NTNGCCTCAGGCNNN

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAGCATTAGG-
WTGSCCTSAGGS

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TAGCATTAGG---
TGAACCGGATTAATGAA

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAGCATTAGG
NGGGATTA--

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAGCATTAGG
VRGGATTARN

MA0003.2_TFAP2A/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAGCATTAGG---
CATTGCCTCAGGGCA

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAGCATTAGG
ATTGCATCAK-