Information for 1-AAAAAAAAAAAG (Motif 1)


Reverse Opposite:

p-value:1e-102
log p-value:-2.364e+02
Information Content per bp:1.500
Number of Target Sequences with motif4653.0
Percentage of Target Sequences with motif17.11%
Number of Background Sequences with motif3422.2
Percentage of Background Sequences with motif12.57%
Average Position of motif in Targets215.6 +/- 107.6bp
Average Position of motif in Background210.7 +/- 119.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAAAAAG--
GTTAAAAAAAAAAATTA

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAAAAAG
AACAAACAACAAGAG

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAAAG-
GTTCAAAAAAAAAATTC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAAAG
TACTGGAAAAAAAA---

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAAAG
AGCCGAAAAAAAAAT--

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAAAAAG
AAATAAGAAAAAAC

MA0041.1_Foxd3/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAAAAAAAAAAG
AAACAAACATTC

MA0481.1_FOXP1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAAAAAAAAAAG
CAAAAGTAAACAAAG

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAAAAAAG
ATATCAAAACAAAACA-

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAAAAAAAAAAG-
-AGAAACGAAAGT