Information for 4-CTCTACTTAA (Motif 10)


Reverse Opposite:

p-value:1e-33
log p-value:-7.811e+01
Information Content per bp:1.692
Number of Target Sequences with motif5728.0
Percentage of Target Sequences with motif21.06%
Number of Background Sequences with motif4940.3
Percentage of Background Sequences with motif18.15%
Average Position of motif in Targets215.7 +/- 125.5bp
Average Position of motif in Background214.5 +/- 122.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0124.1_NKX3-1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CTCTACTTAA
--ATACTTA-

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CTCTACTTAA----
GAAAACTAGTTAACATC

PH0175.1_Vax2/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CTCTACTTAA---
GTGCACTAATTAAGAC

PH0011.1_Alx1_2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTCTACTTAA-----
CGCATTAATTAATTGGC

PH0135.1_Phox2a/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTCTACTTAA-----
NNACTAATTAATNNNN

PH0039.1_Mnx1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTCTACTTAA---
NNNCACTAATTANTNN

PH0147.1_Pou3f2/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTCTACTTAA-----
NNNACTAATTAATTANC

PH0160.1_Shox2/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCTACTTAA-----
CGCGTTAATTAATTGTG

PH0002.1_Alx4/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCTACTTAA-----
CGCATTAATTAATTACC

PH0168.1_Hnf1b/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTCTACTTAA-----
ANNNCTAGTTAACNGNN