Information for 11-ATCTCACAGAGT (Motif 11)


Reverse Opposite:

p-value:1e-33
log p-value:-7.798e+01
Information Content per bp:1.901
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets217.8 +/- 118.0bp
Average Position of motif in Background222.6 +/- 119.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ATCTCACAGAGT
----CACAGN--

MA0442.1_SOX10/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ATCTCACAGAGT
-----ACAAAG-

MA0002.2_RUNX1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATCTCACAGAGT
AAACCACAGAN-

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATCTCACAGAGT------
NGAGGTCANNGAGTTCANNN

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATCTCACAGAGT
ACATCAAAGG--

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ATCTCACAGAGT---
ATTTCCCAGVAKSCY

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ATCTCACAGAGT
ACATCAAAGGNA

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-ATCTCACAGAGT---
NNNNTGCCAGTGATTG

MA0523.1_TCF7L2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--ATCTCACAGAGT
AAAGATCAAAGGAA

MA0100.2_Myb/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--ATCTCACAGAGT
CCAACTGCCA----