Information for 5-TTCACGCCAT (Motif 13)


Reverse Opposite:

p-value:1e-31
log p-value:-7.166e+01
Information Content per bp:1.586
Number of Target Sequences with motif1040.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif712.9
Percentage of Background Sequences with motif2.62%
Average Position of motif in Targets216.3 +/- 117.3bp
Average Position of motif in Background218.2 +/- 118.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TTCACGCCAT
ATCACCCCAT

MA0596.1_SREBF2/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTCACGCCAT
ATCACCCCAT

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTCACGCCAT
TTCCCGCCWG

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TTCACGCCAT
CNGTCACGCCAC

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TTCACGCCAT
VDTTTCCCGCCA-

MA0595.1_SREBF1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTCACGCCAT
ATCACCCCAC

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTCACGCCAT---
NNTTTTCACACCTTNNN

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTCACGCCAT
NYTTCCCGCC--

MA0470.1_E2F4/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTCACGCCAT
NNTTCCCGCCC-

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTCACGCCAT
DTTTCCCGCC--