Information for 7-GGCGCCTGTA (Motif 17)


Reverse Opposite:

p-value:1e-28
log p-value:-6.603e+01
Information Content per bp:1.648
Number of Target Sequences with motif2755.0
Percentage of Target Sequences with motif10.13%
Number of Background Sequences with motif2233.2
Percentage of Background Sequences with motif8.20%
Average Position of motif in Targets217.7 +/- 123.0bp
Average Position of motif in Background211.2 +/- 120.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GGCGCCTGTA---
NNTNCGCACCTGTNGAN

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCCTGTA--
AGCTCGGCGCCAAAAGC

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCGCCTGTA
NNCACCTGNN

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGCGCCTGTA---
GGNGCGNCTGTTNNN

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCGCCTGTA
AGCGCGCC----

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCCTGTA--
CCTTCGGCGCCAAAAGG

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGCGCCTGTA
----GCTGTG

PB0147.1_Max_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCGCCTGTA--
NNGTCGCGTGNCAC

MA0506.1_NRF1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCGCCTGTA--
-GCGCCTGCGCA

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGCGCCTGTA-
NTCGCGCGCCTTNNN