Information for 5-ACTCCAGC (Motif 21)


Reverse Opposite:

p-value:1e-19
log p-value:-4.598e+01
Information Content per bp:1.879
Number of Target Sequences with motif6831.0
Percentage of Target Sequences with motif25.12%
Number of Background Sequences with motif6189.9
Percentage of Background Sequences with motif22.74%
Average Position of motif in Targets213.9 +/- 116.0bp
Average Position of motif in Background210.5 +/- 123.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ACTCCAGC
RSCACTYRAG-

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACTCCAGC
RCATTCCWGG

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACTCCAGC
GCATTCCAGN

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACTCCAGC
AGCCACTCAAG-

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:ACTCCAGC-
----CAGCC

MA0469.1_E2F3/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACTCCAGC--------
-CTCCCGCCCCCACTC

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACTCCAGC--
ATGCCAGACN

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACTCCAGC
RCATTCCWGG

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACTCCAGC
AASCACTCAA--

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACTCCAGC-
NYTTCCCGCC