Information for 7-GCAGTGAG (Motif 22)


Reverse Opposite:

p-value:1e-19
log p-value:-4.400e+01
Information Content per bp:1.936
Number of Target Sequences with motif4656.0
Percentage of Target Sequences with motif17.12%
Number of Background Sequences with motif4116.4
Percentage of Background Sequences with motif15.12%
Average Position of motif in Targets213.5 +/- 116.0bp
Average Position of motif in Background214.0 +/- 122.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGAG---
NNNANTGCAGTGCNNTT

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCAGTGAG--
GCAGTGATTT

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGAG--
NNNNTGCCAGTGATTG

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCAGTGAG--
CGGAAGTGAAAC

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGTGAG---
NNNTGGCAGTTGGTNN

POL002.1_INR/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTGAG
NNNANTGA-

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCAGTGAG
AGAGGAAGTG--

MA0483.1_Gfi1b/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTGAG--
TGCTGTGATTT

MA0067.1_Pax2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCAGTGAG-
-NCGTGACN

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCAGTGAG---
CACGGCAGTTGGTNN