Information for 9-GTGTGATG (Motif 23)


Reverse Opposite:

p-value:1e-17
log p-value:-4.080e+01
Information Content per bp:1.929
Number of Target Sequences with motif1559.0
Percentage of Target Sequences with motif5.73%
Number of Background Sequences with motif1249.4
Percentage of Background Sequences with motif4.59%
Average Position of motif in Targets211.0 +/- 117.8bp
Average Position of motif in Background204.4 +/- 130.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTGTGATG
AGGTGTGAAM

PH0134.1_Pbx1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGATG-----
NNNNNATTGATGNGTGN

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTGTGATG----
--ATGATGCAAT

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTGTGATG----
--MTGATGCAAT

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GTGTGATG-----
TATTATGGGATGGATAA

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTGTGATG
ATGGGGTGAT-

MA0596.1_SREBF2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTGTGATG
ATGGGGTGAT-

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GTGTGATG---
GAAAAGGTGTGAAAATT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGATG--
NNHTGTGGTTWN

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGATG---
TNNNNGGTGTCATNTNT