Information for 18-ACCAATCAGC (Motif 26)


Reverse Opposite:

p-value:1e-14
log p-value:-3.303e+01
Information Content per bp:1.921
Number of Target Sequences with motif134.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif63.4
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets200.3 +/- 115.7bp
Average Position of motif in Background212.8 +/- 122.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0060.2_NFYA/Jaspar

Match Rank:1
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---ACCAATCAGC-----
TGGACCAATCAGCACTCT

MA0502.1_NFYB/Jaspar

Match Rank:2
Score:0.85
Offset:-6
Orientation:forward strand
Alignment:------ACCAATCAGC
AAATGGACCAATCAG-

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ACCAATCAGC
AGCCAATCGG-

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----ACCAATCAGC
ACTAGCCAATCA--

PH0107.1_Msx2/Jaspar

Match Rank:5
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----ACCAATCAGC---
GAAGACCAATTAGCGCT

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ACCAATCAGC----
CGACCCAATCAACGGTG

MA0070.1_PBX1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ACCAATCAGC
CCATCAATCAAA

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ACCAATCAGC--
GAAGATCAATCACTTA

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACCAATCAGC
TCATCAATCA--

PH0097.1_Lhx6_2/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ACCAATCAGC----
TCCACTAATTAGCGGTT