Information for 11-GACGAGTT (Motif 27)


Reverse Opposite:

p-value:1e-14
log p-value:-3.228e+01
Information Content per bp:1.948
Number of Target Sequences with motif262.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif157.8
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets216.7 +/- 123.0bp
Average Position of motif in Background208.0 +/- 129.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GACGAGTT-----
TTTTACGACTTTCCAT

PB0108.1_Atf1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GACGAGTT--
GAATGACGAATAAC

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GACGAGTT------
GAAAACTAGTTAACATC

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GACGAGTT-----
NTNNNAGGAGTCTCNTN

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GACGAGTT
TGACGT---

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GACGAGTT---
NNAGGGACAAGGGCNC

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GACGAGTT--
ANATTTTACGAGNNNN

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GACGAGTT
GGACGTGC-

MA0029.1_Mecom/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GACGAGTT----
AAGATAAGATAACA

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GACGAGTT
GGGTACGTGC-