Information for 19-GAGTAGCGCC (Motif 28)


Reverse Opposite:

p-value:1e-13
log p-value:-3.132e+01
Information Content per bp:1.883
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets235.9 +/- 114.0bp
Average Position of motif in Background187.1 +/- 102.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.76
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGTAGCGCC-----
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGTAGCGCC-----
NNNNTTGGCGCCGANNN

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAGTAGCGCC-----
NTCGCGCGCCTTNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGTAGCGCC-----
ANCGCGCGCCCTTNN

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGTAGCGCC----
NNGGCCACGCCTTTN

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAGTAGCGCC
--AGCGCGCC

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGTAGCGCC-----
NNNGGGGCGCCCCCNN

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAGTAGCGCC
-CGGAGC---

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGTAGCGCC
GGGAGGACNG--

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GAGTAGCGCC-
GCCGCGCAGTGCGT