Information for 16-GTGTTCTC (Motif 31)


Reverse Opposite:

p-value:1e-11
log p-value:-2.593e+01
Information Content per bp:1.963
Number of Target Sequences with motif958.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif766.8
Percentage of Background Sequences with motif2.82%
Average Position of motif in Targets213.3 +/- 118.9bp
Average Position of motif in Background209.5 +/- 124.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTGTTCTC--
CTGTTCCTGG

MA0007.2_AR/Jaspar

Match Rank:2
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------GTGTTCTC
GNACANNNTGTTCTT

MA0133.1_BRCA1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGTTCTC
GTGTTGN-

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTCTC------
AGNGTTCTAATGANN

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GTGTTCTC---
NNANTGGTGGTCTTNNN

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGTTCTC-----
NNNTGTTGTTGTTNG

MA0160.1_NR4A2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGTTCTC
GTGACCTT

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTGTTCTC------
NNAATTCTCGNTNAN

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTGTTCTC------
AGTATTCTCGGTTGC

MA0157.1_FOXO3/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGTTCTC-
-TGTTTACA