Information for 22-GAGTGGAGTGGA (Motif 32)


Reverse Opposite:

p-value:1e-10
log p-value:-2.519e+01
Information Content per bp:1.878
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets212.4 +/- 115.9bp
Average Position of motif in Background188.0 +/- 108.9bp
Strand Bias (log2 ratio + to - strand density)3.1
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GAGTGGAGTGGA
--GTGGAT----

MA0122.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGTGGAGTGGA
TTAAGTGGA-----

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGGAGTGGA
TTGAGTGSTT----

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGGAGTGGA
CTTGAGTGGCT----

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGTGGAGTGGA
NNTGTGGATTSS-

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGGAGTGGA
CTYRAGTGSY-----

MA0479.1_FOXH1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGTGGAGTGGA
-TGTGGATTNNN

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAGTGGAGTGGA
TGCGGAGTGGGACTGG

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGGAGTGGA---
NNNANTGCAGTGCNNTT

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGGAGTGGA---
NNATTGGACTTTNGNN