| p-value: | 1e-9 |
| log p-value: | -2.290e+01 |
| Information Content per bp: | 1.913 |
| Number of Target Sequences with motif | 53.0 |
| Percentage of Target Sequences with motif | 0.19% |
| Number of Background Sequences with motif | 19.4 |
| Percentage of Background Sequences with motif | 0.07% |
| Average Position of motif in Targets | 221.4 +/- 116.2bp |
| Average Position of motif in Background | 217.3 +/- 109.0bp |
| Strand Bias (log2 ratio + to - strand density) | 0.1 |
| Multiplicity (# of sites on avg that occur together) | 2.43 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 1 |
| Score: | 0.71
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | CCCCGTCTGGGA
--CTGTCTGG-- |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 2 |
| Score: | 0.70
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CCCCGTCTGGGA
VBSYGTCTGG-- |
|
|
|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.63
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CCCCGTCTGGGA---
NNTNNTGTCTGGNNTNG |
|
|
|
MA0092.1_Hand1::Tcfe2a/Jaspar
| Match Rank: | 4 |
| Score: | 0.62
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | CCCCGTCTGGGA-
---GGTCTGGCAT |
|
|
|
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 5 |
| Score: | 0.58
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CCCCGTCTGGGA
CCCCCTGCTGTG- |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 6 |
| Score: | 0.56
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | CCCCGTCTGGGA
--TWGTCTGV-- |
|
|
|
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer
| Match Rank: | 7 |
| Score: | 0.55
| | Offset: | 5
| | Orientation: | reverse strand |
| Alignment: | CCCCGTCTGGGA---
-----CSTGGGAAAD |
|
|
|
MA0519.1_Stat5a::Stat5b/Jaspar
| Match Rank: | 8 |
| Score: | 0.55
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | CCCCGTCTGGGA---
----TTCTTGGAAAN |
|
|
|
MA0144.2_STAT3/Jaspar
| Match Rank: | 9 |
| Score: | 0.55
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | CCCCGTCTGGGA--
---CTTCTGGGAAA |
|
|
|
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 10 |
| Score: | 0.55
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | CCCCGTCTGGGA---
---TGTCTGDCACCT |
|
|
|
