Information for 24-GCACSGGGTC (Motif 36)


Reverse Opposite:

p-value:1e-9
log p-value:-2.147e+01
Information Content per bp:1.917
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.06%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets213.1 +/- 102.8bp
Average Position of motif in Background104.6 +/- 118.6bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.81
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCACSGGGTC-----
CGCGCCGGGTCACGTA

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCACSGGGTC-----
AGAGCGGGGTCAAGTA

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCACSGGGTC------
NTNNNGGGGTCANGNNN

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCACSGGGTC------
CTCCAGGGGTCAATTGA

MA0059.1_MYC::MAX/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCACSGGGTC
GACCACGTGGT-

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GCACSGGGTC-
-----AGGTCA

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCACSGGGTC------
GGCGAGGGGTCAAGGGC

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCACSGGGTC--
NNAGGGACAAGGGCNC

PB0043.1_Max_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCACSGGGTC-
CCNNANCACGTGGTCN

MA0104.3_Mycn/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCACSGGGTC
-CACGTGGC-