Information for 2-TAGMTGGGAC (Motif 6)


Reverse Opposite:

p-value:1e-39
log p-value:-9.118e+01
Information Content per bp:1.658
Number of Target Sequences with motif8353.0
Percentage of Target Sequences with motif30.72%
Number of Background Sequences with motif7376.9
Percentage of Background Sequences with motif27.10%
Average Position of motif in Targets214.4 +/- 122.2bp
Average Position of motif in Background212.5 +/- 122.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGMTGGGAC--
--CSTGGGAAAD

PB0115.1_Ehf_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TAGMTGGGAC------
AAGATCGGAANTNNNA

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TAGMTGGGAC---
GGAGAAAGGTGCGA

PB0078.1_Srf_1/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TAGMTGGGAC
TTCCATATATGGAA-

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TAGMTGGGAC--
--CCAGGAACAG

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TAGMTGGGAC--
RGSMTBCTGGGAAAT

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TAGMTGGGAC
CCATATATGGNA-

MA0009.1_T/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TAGMTGGGAC
CTAGGTGTGAA

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TAGMTGGGAC------
TATTATGGGATGGATAA

MA0056.1_MZF1_1-4/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TAGMTGGGAC
---TGGGGA-