Information for 7-AGTTTCTCGGAA (Motif 7)


Reverse Opposite:

p-value:1e-39
log p-value:-9.087e+01
Information Content per bp:1.875
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets228.2 +/- 115.0bp
Average Position of motif in Background277.0 +/- 77.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AGTTTCTCGGAA--
--TTTCTNAGAAAN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AGTTTCTCGGAA--
---TTCTTGGAAAN

MA0518.1_Stat4/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTCTCGGAA-
NNNTTTCCTGGAAA

MA0144.2_STAT3/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGTTTCTCGGAA-
--CTTCTGGGAAA

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGTTTCTCGGAA---
-ATTTCCNGGAAATN

PB0075.1_Sp100_1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGTTTCTCGGAA---
-ATTTTACGGAAAAT

MA0137.3_STAT1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGTTTCTCGGAA-
--TTTCCAGGAAA

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGTTTCTCGGAA-
-NTTTCCNGGAAA

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTTTCTCGGAA---
-NCTTCCNGGAAGNN

MA0520.1_Stat6/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGTTTCTCGGAA--
CATTTCCTGAGAAAT