Information for 3-TKAGSCAGGA (Motif 8)


Reverse Opposite:

p-value:1e-38
log p-value:-8.864e+01
Information Content per bp:1.768
Number of Target Sequences with motif4936.0
Percentage of Target Sequences with motif18.15%
Number of Background Sequences with motif4147.2
Percentage of Background Sequences with motif15.24%
Average Position of motif in Targets215.0 +/- 119.5bp
Average Position of motif in Background211.4 +/- 120.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0598.1_EHF/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TKAGSCAGGA
-CAGGAAGG-

MA0099.2_JUN::FOS/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TKAGSCAGGA
TGAGTCA---

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TKAGSCAGGA
TGACTCAGCA

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TKAGSCAGGA--
-AAGGCAAGTGT

MA0098.2_Ets1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TKAGSCAGGA------
-NNNACAGGAAGTGGN

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TKAGSCAGGA
GCTGASTCAGCA

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TKAGSCAGGA
GATGAGTCAT--

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TKAGSCAGGA
TGAGTCAGCA

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TKAGSCAGGA---
---ANCAGGATGT

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TKAGSCAGGA
DATGASTCAT--