Information for 9-ATVGAATGGAAT (Motif 9)


Reverse Opposite:

p-value:1e-35
log p-value:-8.102e+01
Information Content per bp:1.935
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets222.6 +/- 122.4bp
Average Position of motif in Background217.1 +/- 108.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.93
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:ATVGAATGGAAT--
----NCTGGAATGC

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATVGAATGGAAT----
-TTGAATGAAATTCGA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ATVGAATGGAAT--
----AATGGAAAAT

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATVGAATGGAAT-
TATTATGGGATGGATAA

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATVGAATGGAAT
NNNTATTGAATTGNNN

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ATVGAATGGAAT--
----CCWGGAATGY

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATVGAATGGAAT---
---AGATGCAATCCC

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATVGAATGGAAT--
ACTATGAATGAATGAT

MA0152.1_NFATC2/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ATVGAATGGAAT-
------TGGAAAA

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ATVGAATGGAAT---
-GAGAACCGAAACTG