Information for 1-TCGAATSGAATC (Motif 1)


Reverse Opposite:

p-value:1e-34
log p-value:-7.913e+01
Information Content per bp:1.532
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets277.2 +/- 147.9bp
Average Position of motif in Background419.3 +/- 89.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)6.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0468.1_DUX4/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCGAATSGAATC-
--TAATTTAATCA

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCGAATSGAATC-
---NCTGGAATGC

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCGAATSGAATC--
--AGATGCAATCCC

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCGAATSGAATC---
TTGAATGAAATTCGA

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCGAATSGAATC--
GAGAACCGAAACTG

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TCGAATSGAATC----
-CGTATCGAAACCAAA

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCGAATSGAATC
--TAATTGATTA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCGAATSGAATC-
---AATGGAAAAT

MA0038.1_Gfi1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TCGAATSGAATC----
------CAAATCACTG

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCGAATSGAATC--
NNAGATNVNWATCTN