Information for 15-CAAACCTGCACG (Motif 11)


Reverse Opposite:

p-value:1e-16
log p-value:-3.708e+01
Information Content per bp:1.593
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif417.7
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets282.6 +/- 137.5bp
Average Position of motif in Background274.7 +/- 171.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAAACCTGCACG
CCTCACCTG----

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAAACCTGCACG-
GAAAAAATTGCAAGG

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAACCTGCACG
NNCACCTGNN--

MA0522.1_Tcf3/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAACCTGCACG
CACAGCTGCAG-

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAACCTGCACG---
TCGTACCCGCATCATT

MA0464.1_Bhlhe40/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAAACCTGCACG
CTCACGTGCAC-

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CAAACCTGCACG
NNACTTACCTN----

MA0133.1_BRCA1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAAACCTGCACG
ACAACAC------

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAAACCTGCACG
NNACAGCTGC---

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CAAACCTGCACG---
-------GCACGTAY