Information for 17-ATAAGCCAGGGG (Motif 12)


Reverse Opposite:

p-value:1e-15
log p-value:-3.571e+01
Information Content per bp:1.978
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets211.0 +/- 158.3bp
Average Position of motif in Background337.3 +/- 105.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0155.1_INSM1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATAAGCCAGGGG---
---TGTCAGGGGGCG

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATAAGCCAGGGG
-TAATCCCN---

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATAAGCCAGGGG-
NNTAATCCNGNCNN

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATAAGCCAGGGG----
-ATTGCCTGAGGCAAT

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATAAGCCAGGGG--
----NNCAGGTGNN

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATAAGCCAGGGG
CAGATAAGGN-----

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATAAGCCAGGGG
GCTAATCC-----

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATAAGCCAGGGG
NAGATAAGNN-----

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ATAAGCCAGGGG
--ATGCCAGACN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATAAGCCAGGGG
NBWGATAAGR------