Information for 12-TCKCTCTCTC (Motif 13)


Reverse Opposite:

p-value:1e-11
log p-value:-2.644e+01
Information Content per bp:1.878
Number of Target Sequences with motif233.0
Percentage of Target Sequences with motif7.26%
Number of Background Sequences with motif2110.3
Percentage of Background Sequences with motif4.52%
Average Position of motif in Targets267.4 +/- 139.4bp
Average Position of motif in Background273.4 +/- 164.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCKCTCTCTC------
-ACCACTCTCGGTCAC

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TCKCTCTCTC
NNAATTCTCGNTNAN

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TCKCTCTCTC
AGTATTCTCGGTTGC

MA0469.1_E2F3/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TCKCTCTCTC----
CTCCCGCCCCCACTC

MA0508.1_PRDM1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCKCTCTCTC-----
TCACTTTCACTTTCN

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCKCTCTCTC
AGTTTCAGTTTC

MA0051.1_IRF2/Jaspar

Match Rank:7
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------TCKCTCTCTC-
GTTTTGCTTTCACTTTCC

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TCKCTCTCTC
-YSTTATCT-

MA0024.2_E2F1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TCKCTCTCTC
CCTCCCGCCCN-

MA0471.1_E2F6/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TCKCTCTCTC
NCTTCCCGCCC--