Information for 3-GCTCCACC (Motif 15)


Reverse Opposite:

p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.842
Number of Target Sequences with motif434.0
Percentage of Target Sequences with motif13.52%
Number of Background Sequences with motif4691.9
Percentage of Background Sequences with motif10.05%
Average Position of motif in Targets283.6 +/- 155.9bp
Average Position of motif in Background276.0 +/- 160.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GCTCCACC
GCTCCG--

MA0130.1_ZNF354C/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GCTCCACC
-ATCCAC-

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCACC
NGCTN----

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCTCCACC----
NAGCCCCGCCCCCN

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCTCCACC---
GGCCCCGCCCCC

MA0079.3_SP1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCTCCACC---
GCCCCGCCCCC

MA0599.1_KLF5/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCTCCACC--
GCCCCGCCCC

MA0039.2_Klf4/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTCCACC--
GCCCCACCCA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTCCACC--
GCCMCRCCCH

MA0516.1_SP2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTCCACC-------
GCCCCGCCCCCTCCC