Information for 7-GGCCTGTT (Motif 21)


Reverse Opposite:

p-value:1e-6
log p-value:-1.402e+01
Information Content per bp:1.976
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif799.1
Percentage of Background Sequences with motif1.71%
Average Position of motif in Targets273.4 +/- 157.8bp
Average Position of motif in Background278.4 +/- 160.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.72
Offset:-8
Orientation:forward strand
Alignment:--------GGCCTGTT
GGGGCCGAGGCCTG--

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTGTT
CNAGGCCT---

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGCCTGTT
AGGCCTAG-

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGCCTGTT
--GCTGTG

MA0480.1_Foxo1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGCCTGTT----
-TCCTGTTTACA

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGCCTGTT--
BRRCVGTTDN

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGCCTGTT---
GGNGCGNCTGTTNNN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCCTGTT-
-GGCVGTTR

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGCCTGTT---
---CTGTTTAC

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCCTGTT--
TGGCAGTTGG