Information for 21-TTATTATTAT (Motif 22)


Reverse Opposite:

p-value:1e-5
log p-value:-1.380e+01
Information Content per bp:1.923
Number of Target Sequences with motif257.0
Percentage of Target Sequences with motif8.00%
Number of Background Sequences with motif2763.5
Percentage of Background Sequences with motif5.92%
Average Position of motif in Targets274.7 +/- 161.9bp
Average Position of motif in Background273.9 +/- 155.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0069.1_Sox21_1/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TTATTATTAT----
NNTAATTATAATNANN

PB0064.1_Sox14_1/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TTATTATTAT----
NNTAATTATAATTNNN

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TTATTATTAT----
NANTATTATAATTNNN

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TTATTATTAT----
NCGTATTATAATCNTA

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TTATTATTAT-
TCTTTANTAATANN

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTATTATTAT-
NCNTTTGTTATTTNN

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTATTATTAT--
NNTTTTTCTTATNT

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTATTATTAT--
CTATAATTGTTAGCG

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTATTATTAT----
TAATTGTTCTAAAC

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTATTATTAT
-AATTATT--