Information for 22-CGCGGCTTTT (Motif 25)


Reverse Opposite:

p-value:1e-4
log p-value:-9.876e+00
Information Content per bp:1.739
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets213.8 +/- 170.5bp
Average Position of motif in Background103.3 +/- 72.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)6.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGCGGCTTTT---
GGNGCGNCTGTTNNN

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGCTTTT-
NTCGCGCGCCTTNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CGCGGCTTTT-
ANCGCGCGCCCTTNN

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------CGCGGCTTTT
NNGCNCTGCGCGGC----

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGCGGCTTTT
AGCGCGCC----

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGCGGCTTTT
---NGCTN--

MA0048.1_NHLH1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCGGCTTTT-
GCGCAGCTGCGT

PB0147.1_Max_2/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CGCGGCTTTT
GTGCCACGCGACTG--

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CGCGGCTTTT
NNGGCCACGCCTTTN

MA0146.2_Zfx/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGCGGCTTTT
GGGGCCGAGGCCTG-