Information for 11-GCACATGTATCC (Motif 6)


Reverse Opposite:

p-value:1e-18
log p-value:-4.340e+01
Information Content per bp:1.700
Number of Target Sequences with motif150.0
Percentage of Target Sequences with motif4.67%
Number of Background Sequences with motif957.7
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets285.2 +/- 140.4bp
Average Position of motif in Background277.4 +/- 168.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.52
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0058.2_MAX/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GCACATGTATCC
AAGCACATGG----

PH0083.1_Irx3_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCACATGTATCC-
ANTATTACATGTANNNN

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GCACATGTATCC-
NNTATTACATGTANNNT

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCACATGTATCC-
ANTNTTACATGTATNTA

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCACATGTATCC-
ANTNNTACATGTANNTN

MA0147.2_Myc/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCACATGTATCC
AAGCACATGG----

PH0085.1_Irx4/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GCACATGTATCC-
NNTTTTACATGTANNNT

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCACATGTATCC-
ANTTNTACATGTANTTN

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GCACATGTATCC
NNTNCGCACCTGTNGAN

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCACATGTATCC
GTCACGTGGM---