| p-value: | 1e-17 |
| log p-value: | -3.947e+01 |
| Information Content per bp: | 1.978 |
| Number of Target Sequences with motif | 11.0 |
| Percentage of Target Sequences with motif | 0.34% |
| Number of Background Sequences with motif | 2.3 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 335.4 +/- 96.6bp |
| Average Position of motif in Background | 410.3 +/- 7.0bp |
| Strand Bias (log2 ratio + to - strand density) | 3.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer
| Match Rank: | 1 |
| Score: | 0.71
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | GAGTTAGTGCCC-
-GGTTAGAGACCT |
|
|
|
PB0133.1_Hic1_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.64
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | GAGTTAGTGCCC------
--GGGTGTGCCCAAAAGG |
|
|
|
PH0123.1_Obox3/Jaspar
| Match Rank: | 3 |
| Score: | 0.61
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GAGTTAGTGCCC----
ATAGTTAATCCCCCNNA |
|
|
|
PH0121.1_Obox1/Jaspar
| Match Rank: | 4 |
| Score: | 0.59
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GAGTTAGTGCCC----
NTAGTTAATCCCCTTAN |
|
|
|
PH0122.1_Obox2/Jaspar
| Match Rank: | 5 |
| Score: | 0.59
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GAGTTAGTGCCC----
ATAGTTAATCCCCCTCA |
|
|
|
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
| Match Rank: | 6 |
| Score: | 0.58
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | GAGTTAGTGCCC
--TTAAGTGCTT |
|
|
|
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
| Match Rank: | 7 |
| Score: | 0.57
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GAGTTAGTGCCC
TGATTTATGGCC- |
|
|
|
PH0124.1_Obox5_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.57
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GAGTTAGTGCCC---
NANANTTAATCCCNNNN |
|
|
|
MA0485.1_Hoxc9/Jaspar
| Match Rank: | 9 |
| Score: | 0.57
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GAGTTAGTGCCC
NTGATTTATGGCC- |
|
|
|
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong et al.)/Homer
| Match Rank: | 10 |
| Score: | 0.57
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | GAGTTAGTGCCC--
AGGTCANTGACCTN |
|
|
|
