Information for 1-TTTTTTTTTT (Motif 1)


Reverse Opposite:

p-value:1e-73
log p-value:-1.692e+02
Information Content per bp:1.530
Number of Target Sequences with motif2995.0
Percentage of Target Sequences with motif22.62%
Number of Background Sequences with motif6053.4
Percentage of Background Sequences with motif16.49%
Average Position of motif in Targets220.6 +/- 110.8bp
Average Position of motif in Background225.5 +/- 127.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTTT----
NNNNTTTTTTTTTNAAC

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTTT----
GNATTTTTTTTTTGANC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TTTTTTTTTT-----
-TTTTTTTTCNNGTN

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTTTTTT---
NTNTTGTTGTTTGTN

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TTTTTTTTTT-----
NNTTTNTTTTNGNNN

MA0041.1_Foxd3/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTTTTTTTTT
GAATGTTTGTTT

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTTTTTTTT----
NNTTTTTCTTATNT

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTTTTTT-----
NNTTTTGTTTTGATNT

MA0042.1_FOXI1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTTTTTTTTT
GGATGTTTGTTT

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTTTTTT--
NCNTTTGTTATTTNN