Information for 15-TATATAGATCTA (Motif 13)


Reverse Opposite:

p-value:1e-12
log p-value:-2.985e+01
Information Content per bp:1.960
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets328.2 +/- 110.4bp
Average Position of motif in Background197.6 +/- 159.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TATATAGATCTA
TCTTTATATATAAATA

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TATATAGATCTA
-NTATYGATCH-

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------TATATAGATCTA
ATGGGATATATCCGCCT-

MA0033.1_FOXL1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TATATAGATCTA
TATGTNTA----

PB0198.1_Zfp128_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TATATAGATCTA--
TGTATATATATACC

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------TATATAGATCTA
NNNNNNCTTTTATAN-----

MA0108.2_TBP/Jaspar

Match Rank:7
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------TATATAGATCTA
NNNNNNCTTTTATAN-----

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TATATAGATCTA-
NAGATWNBNATCTNN

PH0082.1_Irx2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TATATAGATCTA-----
TAAATACATGTAAAATT

MA0072.1_RORA_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TATATAGATCTA
TATAAGTAGGTCAA