Information for 19-CTGCCCGGCC (Motif 15)


Reverse Opposite:

p-value:1e-12
log p-value:-2.817e+01
Information Content per bp:1.954
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif44.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets216.8 +/- 123.4bp
Average Position of motif in Background208.6 +/- 109.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.81
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CTGCCCGGCC
NNGCNCTGCGCGGC-

MA0597.1_THAP1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTGCCCGGCC
CTGCCCGCA-

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTGCCCGGCC----
ATGCCCGGGCATGT

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGCCCGGCC---
-GGCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGCCCGGCC----
NAGCCCCGCCCCCN

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGCCCGGCC-------
--GCCCCGCCCCCTCCC

MA0146.2_Zfx/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGCCCGGCC--
GGGGCCGAGGCCTG

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGCCCGGCC------
TACGCCCCGCCACTCTG

MA0470.1_E2F4/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCCGGCC
NNTTCCCGCCC

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTGCCCGGCC-
---CTAGGCCT