Information for 7-TCTCTCTC (Motif 18)


Reverse Opposite:

p-value:1e-10
log p-value:-2.419e+01
Information Content per bp:1.952
Number of Target Sequences with motif3298.0
Percentage of Target Sequences with motif24.91%
Number of Background Sequences with motif8260.2
Percentage of Background Sequences with motif22.50%
Average Position of motif in Targets220.2 +/- 120.4bp
Average Position of motif in Background220.1 +/- 129.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCTC------
ACCACTCTCGGTCAC

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCTCTC--
NNAATTCTCGNTNAN

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCTCTCTC--
CTGTCTGTCACCT

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCTCTCTC----
NNAGTCCCACTCNNNN

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTCTC--
TGTCTGDCACCT

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCTCTCTC--
ACTTTCACTTTC

MA0471.1_E2F6/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCTCTCTC
NCTTCCCGCCC

MA0527.1_ZBTB33/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTCTCTC--------
-CTCTCGCGAGATCTG

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCTCTCTC--
AGTATTCTCGGTTGC

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTCTC-
NYTTCCCGCC