Information for 8-GTGTGTGT (Motif 19)


Reverse Opposite:

p-value:1e-10
log p-value:-2.416e+01
Information Content per bp:1.939
Number of Target Sequences with motif2162.0
Percentage of Target Sequences with motif16.33%
Number of Background Sequences with motif5249.3
Percentage of Background Sequences with motif14.30%
Average Position of motif in Targets215.5 +/- 119.1bp
Average Position of motif in Background225.9 +/- 148.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.87
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGTGT----
NNGCGTGTGTGCNGCN

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTGTGTGT--
NTGGGTGTGGCC

MA0472.1_EGR2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGTGT---
GTGCGTGGGCGGGNG

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGTGT----
NNNNTTGTGTGCTTNN

MA0493.1_Klf1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGTGT--
TGGGTGTGGCN

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTGTGTGT
-TGCGTG-

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTGTGTGT-
NGCGTGGGCGGR

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGTGT-
TGGGTGTGGC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTGTGTGT
TGCGTGGGYG-

POL007.1_BREd/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGTGTGT
GTTTGTT-