Information for 2-GAATGGAATGGA (Motif 2)


Reverse Opposite:

p-value:1e-49
log p-value:-1.138e+02
Information Content per bp:1.967
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets214.8 +/- 126.2bp
Average Position of motif in Background260.2 +/- 139.6bp
Strand Bias (log2 ratio + to - strand density)2.4
Multiplicity (# of sites on avg that occur together)7.75
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GAATGGAATGGA---
TATTATGGGATGGATAA

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAATGGAATGGA
-NCTGGAATGC-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAATGGAATGGA
-CCWGGAATGY-

MA0090.1_TEAD1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAATGGAATGGA
CNGAGGAATGTG

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAATGGAATGGA
-CCWGGAATGY-

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAATGGAATGGA
-AATGGAAAAT-

PB0068.1_Sox1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAATGGAATGGA--
NNNTATTGAATTGNNN

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAATGGAATGGA-
TTGAATGAAATTCGA

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GAATGGAATGGA
ACTATGAATGAATGAT-

MA0081.1_SPIB/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAATGGAATGGA
-AGAGGAA----